You will need to go through a manual reconciliation prior to filing your VAT for the quarter. To do this you will need to run the VAT detail report found under the VAT menu. The report lists all the transactions that correspond to the box numbers on the VAT return.
You should also run the VAT exception report which lists the transactions containing VAT that have been added, modified or deleted in prior filed VAT periods which have therefore changed the company's VAT liability.
The report will identify the transactions that have changed and the amount of the change. Use the report prior to filing your VAT to correct the data entry mistake, or to confirm that the transaction is correct and then proceed to filing VAT.
It is also worth reviewing prior VAT returns if you need to check if a particular transaction has already been filed.
There are help options available on all reports to help you understand the information on them and a definition of all the fields.
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